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Handbook of Hidden Markov Models in Bioinformatics - Gollery, Martin

Focuses on how to choose and use various methods and programs available for HMMs. This work explores HMM implementations important in bioinformatics, including SAM, HMMER, Wise2, PSI-BLAST, and Meta-MEME, and shows how numerous databases and programs, such as Pfam, SMART, SUPERFAMILY, and PANTHER, are used in bioinformatics projects.

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